When managed service providers (MSPs) evaluate new billing software, one of the first and most important questions they ask is, “Does this billing software integrate with the tools I already use?” 

The answer to that question often determines whether a billing platform can genuinely deliver on its promise of efficiency and scalability. 

A connected ecosystem ensures accurate invoice delivery, eliminates billing bottlenecks, and maintains smooth financial operations.

FlexPoint is purpose-built for MSPs with this goal in mind. When a billing/payment software like FlexPoint integrates with your PSA (Professional Services Automation) software and accounting software, it helps automate the entire billing lifecycle end-to-end. 

These connections create a streamlined, end-to-end billing workflow that encompasses time tracking, invoice generation, client approval, revenue collection, and payment reconciliation. 

By syncing key billing operations and financial systems, FlexPoint eliminates manual data entry, reduces billing errors, and accelerates payment collection. 

In this article, we’ll explore the top five FlexPoint integrations MSPs ask about before booking a product tour or demo. 

We’ll also discuss how FlexPoint seamlessly integrates into a modern billing tech stack, enabling your MSP business to deliver a better payment experience, receive faster payments, and achieve stronger profitability.

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Why Integration Matters in MSP Billing Software

The integration of core applications is considered vital for delivering seamless service for 90% of MSPs.

When billing software doesn’t integrate seamlessly with your PSA and accounting platform, you’re left managing disconnected tools that don’t talk to each other. 

This often results in the need for manual data copying from one system to another. Also, it leads to an increase in mistakes, duplications, or missing information. 

Additionally, manual processes lead to mismatched invoice amounts, delayed payments, or time-consuming reconciliations at the end of the month for the MSP finance teams.

Disconnected systems mean inconsistent data across your tech stack. Integration eliminates these pain points by ensuring that information flows automatically between systems. 

Time entries, usage data, and service adjustments are all captured directly into invoices. Invoices are connected to your accounting platform for accurate tracking, payment handling, and deposit reconciliation. Payments sync back into your billing software PSA to reflect status updates. 

This streamlining not only boosts efficiency and accuracy, but it also frees your team to focus on client service, rather than on administrative cleanup. 

Integrated billing is foundational in today’s MSP environment. Here are some core functions that depend on integration for smooth execution:

• Pulling Service Ticket Data From the PSA: Integrating billing software with a PSA enables the automatic transfer of service ticket data, including resource usage and service technician hours, from the PSA into the billing system. This eliminates manual data entry, ensures accuracy, and speeds up invoicing. With this integration, every billable action logged in the PSA is transmitted directly to the billing platform, enabling MSPs to generate timely, detailed, and error-free invoices based on actual service delivery.

• Syncing Invoice and Payment Records With Accounting Systems: Integrating billing software with accounting systems enables automatic syncing of invoice and payment records, reducing the need for manual entry. This ensures that financial data, such as invoices issued, payments received, and outstanding balances, is always up to date across both platforms. In addition, it also allows MSPs to instantly identify overdue payments and generate accurate aging reports, making it easier to follow up with clients and maintain healthy cash flow. As a result, MSPs gain accurate financial reporting, streamlined bookkeeping, and improved compliance while minimizing errors and saving time on administrative tasks. 

• Applying Taxes, Surcharges, or Discounts Based on Service Packages: Integration helps automatically apply taxes, surcharges (for credit card payments only, where permitted by law), or discounts based on service packages by pulling data from your PSA. This data includes service types, customer location, and pricing tiers, and is synced with your billing and accounting systems. This ensures the correct tax rates, fees, or discounts are applied consistently according to predefined rules, without manual calculation. Furthermore, it reduces errors, speeds up invoicing, and ensures compliance with tax regulations across different regions or service levels.

• Reconciling Payment Records and Aging Receivables: Integration helps reconcile and manage aging receivables by automatically syncing payment data from accounting software directly into your billing software and vice versa. This real-time synchronization ensures that invoices are marked as paid when a transaction occurs, reducing manual entry and the risk of errors. 

FlexPoint was designed for MSPs with integration in mind, not as a standalone tool that requires manual entries. FlexPoint offers a comprehensive payment automation solution that integrates seamlessly with existing MSP systems and is fully customizable to meet each client's unique needs.

Top 5 FlexPoint Integrations MSPs Ask About

MSPs rely on FlexPoint not only for billing and payments, but also for its seamless integration with the systems they use daily. 

Whether it’s syncing with a PSA, automating accounting workflows, or streamlining payment reconciliation, FlexPoint’s most requested integrations reflect the real-world priorities of MSPs. 

The platform helps reduce manual work, improve data accuracy, and speed up payment collections. 

Below are the top five integrations MSPs consistently ask about and for good reason:

1. QuickBooks Online

QuickBooks Online is a cloud-based accounting platform that automates critical financial processes for companies. This includes bookkeeping, bank reconciliation, expense tracking, financial reporting, and tax preparation. 

For most small businesses, including MSPs, it’s an essential tool for maintaining accurate ledgers, generating profit and loss statements, and ensuring compliance with tax regulations. 

FlexPoint offers a tight, two-way integration with QuickBooks Online (QBO), automating billing, reconciliation, and synchronizing invoice data. 

FlexPoint integrates seamlessly with QuickBooks Online in just a few simple steps. 

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Setting up the FlexPoint-QuickBooks Online integration is straightforward. 

After logging into your FlexPoint account, users can navigate to the Integrations section and connect directly to QuickBooks Online. 

Once prompted, users can log in to their QuickBooks account and authorize the connection.

From there, syncing begins automatically pushing invoices, payments, and financial data from FlexPoint into QuickBooks (and vice versa) for accurate bookkeeping, reconciliation, and streamlined financial reporting.

Also, you can generate client invoices in FlexPoint, which then seamlessly syncs financial data with QuickBooks Online. This helps streamline bookkeeping, speeding up reconciliation and simplifying tax reporting without the need for manual data entry. 

Alternatively, if the invoices are created and sent via QuickBooks Online, that data is also synced automatically to FlexPoint.

Let’s take, for instance, SkyCamp Technologies, an Ohio-based MSP, which was scaling its billing operations. However, managing payments became burdensome due to the need to juggle multiple payment processing platforms. 

Specifically, their QuickBooks ACH lacked full integration with their former invoicing platform, resulting in the manual processing of each monthly ACH payment, as invoice amounts varied based on customer license counts.

The lack of integration meant that SkyCamp had to manually process payments, which was a time-consuming process. They sought end-to-end automation to reduce time spent on accounting and manual reconciliation and ensure error-free books.

Since switching to FlexPoint, SkyCamp experienced a significant overhaul of its billing operations. 

FlexPoint's auto-syncing and reconciliation with QuickBooks Online eliminated their existing payment processing issues, ensuring that all of SkyCamp’s accounting was in one centralized place and making reconciliation low-maintenance.

The Results of Using FlexPoint for SkyCamp Technologies: 

• This has led to an 8-hour reduction in work per month.
• A 20% increase in AutoPay means predictable cash flow every month.
• They also increased payment speed from late clients by 30%.

2. QuickBooks Desktop

QuickBooks Desktop is a robust, on-prem (locally installed) accounting solution trusted by many small businesses (including MSPs) for its advanced financial management capabilities. 

QuickBooks Desktop offers comprehensive features like detailed bookkeeping, invoicing, bank reconciliation, job costing, and tax reporting. 

For MSPs, it delivers precision and control when tracking income and expenses, managing client accounts, and generating financial statements. 

FlexPoint integrates with QuickBooks Desktop via the Intuit Web Connector, allowing seamless data exchange between the two platforms. 

Setting up the FlexPoint-QuickBooks Desktop integration is straightforward. 

To get started, users install the Web Connector, then download a configuration file directly from the FlexPoint Integrations page. 

After launching the Web Connector, it is connected by importing the configuration file into QuickBooks Desktop.

When integrated with FlexPoint, QuickBooks Desktop automatically receives the client invoice data created in FlexPoint. This sync eliminates manual data entry, making bookkeeping, deposit reconciliation, and tax reporting faster and more accurate. 

Alternatively, if invoices are created and sent via QuickBooks Desktop, that data is also synced automatically to FlexPoint. This bi-directional syncing streamlines bookkeeping and ensures accurate reconciliation & financial reporting.

Let’s take the example of TAZ Networks, a Michigan-based MSP, which previously was manually sending invoices from QuickBooks Desktop. 

They were spending time chasing past-due payments and re-sending invoices to clients, which was a compounding issue.

Due to the limitations of QuickBooks Desktop, TAZ Networks had accumulated a sizable past-due statement. In addition, their clients had no centralized place to look for their invoices (both paid and unpaid).

Since switching to FlexPoint, TAZ Networks has significantly reduced its manual workload in its accounting department. 

The MSP’s owner was immediately impressed by FlexPoint’s reasonable pricing and easy-to-navigate interface. FlexPoint’s client portal became a hit from day one.

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The Results of Using FlexPoint for TAZ Networks: 

• They experienced a 4x reduction in AR aging.
• Additionally, a 30% decrease in invoicing time.

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3. Xero

Xero is a cloud-based accounting platform tailored for small to medium-sized businesses. 

The accounting software offers robust tools for invoicing, bank reconciliation, expense tracking, financial reporting, and tax compliance. 

For MSPs, Xero provides a reliable financial foundation, enabling teams to manage day-to-day transactions effectively. Xero also helps maintain cash flow visibility and keeps accurate, audit-ready financial records at all times.

FlexPoint integrates tightly with Xero through a secure, two-way connection, ensuring that your invoicing and payment data remain accurate and up-to-date in both systems. 

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This eliminates the need for manual entry or reconciliation between billing and accounting platforms, reducing errors and freeing up valuable time for finance and operations teams.

Setting up the FlexPoint-Xero integration is straightforward. 

After logging into FlexPoint, users can navigate to the Integrations section and select Xero. 

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From there, they log into their Xero account and authorize the connection. Once linked, FlexPoint begins to automatically sync billing, invoice, and payment data.

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This integration supports a flexible billing workflow, whether invoices are created in FlexPoint or Xero. Both platforms remain synchronized, meaning payments recorded in one system are instantly reflected in the other, ensuring consistent records across your entire financial stack. 

By automating these sync processes, the FlexPoint–Xero integration streamlines deposit reconciliation, speeds up accurate financial reporting, and simplifies billing compliance. 

4. ConnectWise PSA

ConnectWise is a robust PSA platform that enables MSPs to manage client IT operations, track service delivery, manage inventory, and streamline internal processes, all from a single centralized system. The PSA software captures critical business data, including service tickets, technician time entries, client contracts, and project work, all in one single platform. 

This helps MSP teams stay efficient and compliant with Service Level Agreements (SLA).

FlexPoint offers seamless, two-way integration with ConnectWise, automatically pulling real-time data, including tickets, time entries, and agreements, into your billing workflow. 

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This connection ensures that every billable activity is accurately captured and invoiced, eliminating the need for manual input and reducing the risk of missed revenue.

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Setting up the FlexPoint-ConnectWise integration is straightforward. 

After logging into ConnectWise, users simply create a new API Member, input FlexPoint-specific credentials, and generate API keys. These credentials are then added to the Integrations section within the FlexPoint platform.

Once connected, FlexPoint begins syncing billing-related data in real time, automating the generation of client invoices based on actual service delivery. 

Whether you’re billing for hourly work, recurring contracts, or project milestones, FlexPoint ensures invoices are always accurate, timely, and aligned with data in ConnectWise. This integration streamlines your billing operations, improves revenue accuracy, and reduces administrative overhead across service and finance teams.

Consider, for instance, Excellent Networks, a Texas-based MSP, encountered significant hurdles with its invoicing and payment collection. 

They used to send invoices through ConnectWise, and the majority of payments from customers were collected via physical checks, which sometimes went missing in the mail.

Mark Luna, President at Excellent Networks, was keen to find a solution to streamline their invoicing and eliminate this extensive manual work.

Upon researching payment portals used by other MSPs, Mark Luna discovered FlexPoint.

The onboarding process for FlexPoint was straightforward, requiring just a few clicks for Mark to set up his account and sync all of Excellent Networks' invoices to the platform. 

From that point, FlexPoint streamlined and automated its payment processing with a single click.

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Excellent Networks integrated ConnectWise with FlexPoint to streamline their operations. This resulted in seamless data synchronization and improved invoice management. 

Moreover, the integration significantly reduced manual data entry and improved the billing process.

The Results of Using FlexPoint for Excellent Networks: 

• Improved payment speed by 80%
• 24 hours saved per year in billing time due to FlexPoint’s integration.

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5. SuperOps

SuperOps is a modern, cloud-based PSA platform purpose-built for MSPs to streamline daily operations, boost efficiency, and centralize service management. 

The PSA/RMM platform serves as a centralized operational hub where MSPs can manage service tickets, client agreements, technician time, and asset lifecycles. The platform also helps ensure SLA compliance, all within one intuitive interface.

FlexPoint offers a seamless, two-way integration with SuperOps, enabling MSPs to synchronize billing workflows and eliminate manual data handling between systems. 

This integration ensures that invoice and payment data stay consistent, accurate, and up-to-date across both platforms.

Setting up the FlexPoint-ConnectWise integration is straightforward. 

Within SuperOps, users can generate an API token by navigating to Settings → API Token. That token, along with the SuperOps subdomain, is then added to FlexPoint under Settings → Integrations to establish a secure connection.

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Once connected, invoices created in SuperOps are automatically pulled into FlexPoint for centralized billing and payment processing. 

When payments are collected through FlexPoint, the corresponding invoice status is automatically updated in SuperOps, ensuring both systems remain aligned without requiring manual intervention. 

This integration streamlines financial operations, enhances billing accuracy, and provides MSPs with comprehensive visibility and control over the entire billing lifecycle.

What These Integrations Do for Your MSP Billing Workflow

When FlexPoint is integrated with your PSA and accounting software. This billing workflow transforms from a fragmented, manual process into a seamless, automated engine. 

Here’s how each connection delivers real-world results that improve your operations, cash flow, and client satisfaction:

1. Time Savings:

Integrating FlexPoint with your PSA and accounting software transforms billing from a manual, time-consuming task into a streamlined, automated workflow. 

For example, when a service ticket or agreement is closed in the PSA, FlexPoint automatically pulls the relevant data, like time entries and rates, into a draft invoice. 

The invoice can then be synced directly into QuickBooks (Online/Desktop) for accounting, reconciliation, and reporting. 

This seamless flow means you no longer have to manually copy and paste details between systems or double-check for mismatches. 

Instead, automation ensures that every billable item is captured. Your invoices are sent out faster and automatically (based on predefined schedules), and your financial records stay up to date. This integration dramatically reduces human error and administrative time.

Let's take, for instance, Compunet Technologies, a California-based MSP, which was trying to upgrade its payment processing. 

The company's prior payment solution had been acquired, resulting in changes to its offering and complicating its working relationship.

The company's President, Michael Leonard, discovered FlexPoint, which offered even more features than their previous platform and only required minor changes to their workflow.

Using FlexPoint, they streamlined their billing operations through automation, replacing manual data entry between systems and reducing the need for constant oversight. 

Moreover, FlexPoint's AutoPay feature helped Compunet streamline its billing process. This allows it to send invoices to clients on the first of the month automatically and then receive payments just a couple of days later. 

Also, it eliminated the need for the team to spend time tracking down payments, as many clients switched to FlexPoint's auto-charge option.

The Results of Using FlexPoint for Compunet Technologies: 

• Monthly billing time was reduced from 5 hours a day to 15 minutes.
• Compunet now receives nearly all client payments within 72 hours, resulting in 4x faster billing cycles.

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2. Fewer Billing Errors:

When your PSA tool is integrated with FlexPoint, every time an entry, service ticket, or contract detail is created, it is automatically and in real-time integrated into your billing system. 

FlexPoint pulls data from your PSA and maps service activities to the correct billable items, eliminating the need for manual entry or reconciliation. 

This ensures that invoices always reflect the actual work performed, reducing discrepancies between PSA records and billing. 

The result is a smoother, more accurate billing process with fewer errors.

Beyond improved billing accuracy, FlexPoint also improves accounting accuracy by keeping your PSA, billing, and accounting systems in sync. 

With seamless data flow, you avoid duplicate entries, mismatched amounts, and manual errors. 

This gives your finance team confidence that billing matches the books, making audits, reconciliations, and month-end reporting much easier.

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3. Improved Collections:

FlexPoint automates payment reminders and tracks invoice statuses in real time, so your team no longer needs to chase down late payments. 

Additionally, if a payment fails, your team will be notified immediately, as well as the client.

This automation leads to fewer follow-ups, faster payment collections, and a substantial reduction in aged receivables. 

Hence, you turn billing operations into a predictable, hands-free revenue engine.

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4. Financial Visibility:

FlexPoint’s integration with leading accounting software creates a unified billing ecosystem where transactions flow effortlessly between platforms. 

Invoices generated in FlexPoint automatically sync with your accounting tool, and client payments made through the portal instantly reflect across both systems, with matched transactions and up-to-date aging reports.

This real-time synchronization eliminates traditional data silos, giving you instant visibility into collections, client payment behavior, and revenue trends. 

With accurate financial insights at your fingertips, your team can shift from reactive troubleshooting to proactive financial management.

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For instance, Tomorrow’s Technology Today, an Ohio-based MSP, was seeking a solution to streamline its payment processes and secure consistent cash flow.

Their previous platforms were cumbersome, requiring a steep learning curve for both their Accounts Receivable team and clients, which negatively impacted internal efficiency and client experience.

The CEO and President, Lisa Niekamp-Urwin, needed a user-friendly, flexible, and secure platform that wouldn't lock them into long-term contracts.

Since switching to FlexPoint, Tomorrow’s Technology Today has transformed its payment processing and gained real-time financial insight. 

FlexPoint's intuitive user interface (UI) was a key factor, as deposits, payments, and invoices were clearly displayed via the platform's dashboard, providing her team with a top-level view of the company’s cash flow with a single click.

The Results of Using FlexPoint for Tomorrow’s Technology Today:

• Tomorrow’s Technology Today saved 30 minutes per invoice.
• They achieved a 5% reduction in accounts receivable balances.

5. Client Satisfaction: 

Faster invoice delivery goes a long way in building client trust and minimizing disputes. 

By integrating FlexPoint with core MSP tools, such as PSA systems and accounting platforms, the billing process is automated and accurate. Invoices are then quickly reviewed (if requiring approvals), often auto-generated, automatically delivered to clients, and finally synced with the accounting software for seamless deposit reconciliation. 

A streamlined billing workflow ensures that clients receive timely, accurate invoices that accurately reflect the services rendered. 

This leads to fewer questions, quicker payment approvals, and a more transparent client relationship.

Let’s consider, for example, Limetree Labs, an Idaho-based MSP, which was seeking an end-to-end payment solution to simplify complex invoicing.

Popular solutions, such as QuickBooks, were insufficient for handling complex invoices and relied on email-based payments, which were prone to phishing attacks.

Bobby Lind, President and Founder of Limetree Labs, critically needed a solution that offered airtight security and a streamlined invoicing workflow.

After a trusted contact referred them to FlexPoint and a quick 15-minute demo, Limetree Labs found its ideal solution. 

Since switching to FlexPoint, Limetree Labs has implemented a secure payments portal that empowers their clients to view, manage, and pay invoices autonomously.

FlexPoint's customizable features, including AutoPay and payment reminders, enabled Limetree Labs to tailor its billing to each client's specific needs.

This automation, combined with the secure payments portal, directly led to fewer billing mistakes and faster invoice delivery. 

It also ensures sensitive client payment data is kept safe and the process is standardized, unlike the insecure email-based methods used previously. 

This enhanced security and efficiency improved client trust, helping Limetree Labs reduce potential payment disputes, as clients had clear, secure access to all their invoice details.

The Results of Using FlexPoint for Limetree Labs: 

• Limetree Labs achieved 50% faster invoice processing times.
• They saw a 30% boost in operational efficiency.
• They experienced millions of dollars in saved client retention costs.

How to Evaluate FlexPoint Integration Compatibility with Your Stack

Before diving into a sales call or product tour, assessing whether FlexPoint will fit seamlessly into your existing tech ecosystem is smart. 

This practical guide will help you pre-qualify FlexPoint’s integration compatibility, saving time and setting the stage for a more productive conversation with your team.

1. Inventory Your Current Tools

Start by mapping out the core platforms your business relies on to manage operations and finances. This includes:

• PSA: Tools like ConnectWise, Autotask, SuperOps, or HaloPSA that manage tickets, projects, and time tracking.
• Accounting Software: QuickBooks Online, QuickBooks Desktop, Xero, for invoicing, bookkeeping, and financial reporting.
• Payment Processors: Services like Stripe and PayPal handle client payments and subscriptions.

Creating a simple inventory of these tools helps you immediately identify where integration with FlexPoint would be most beneficial. 

This step also prepares you to ask focused questions when reviewing integration options or speaking with FlexPoint’s team.

2. Check for Native Integrations

FlexPoint offers direct integrations with many popular MSP tools. Visit FlexPoint’s Integrations page to confirm whether your current systems are supported out of the box. 

Standard integrations include platforms such as ConnectWise, QuickBooks, Xero, and SuperOps.

3. Evaluate API Flexibility

If you use a more niche or custom-built tool, don’t worry. FlexPoint supports open API connections, allowing for custom integrations. 

Check with your technical team to see how easily your stack can connect via APIs.

4. Assess Your Team’s Workflow

Examine how data currently flows or fails to flow between departments. 

• Are invoices manually created from PSA tickets? 
• Is your finance team constantly chasing down payment records? 

Identifying pain points will help you understand where FlexPoint can eliminate bottlenecks through real-time data syncing and automation.

5. Ask During the Demo

When scheduling a product tour, please come prepared. Here are a few targeted questions to ask during the demo:

• “Does FlexPoint offer a native integration with [your PSA/accounting software]?”
• “Can invoices and payment statuses sync automatically between FlexPoint and [your accounting tool]?”
• “If we use custom software, can FlexPoint connect via API?”
• “What data is exchanged in each integration, and how often does it sync?”
• “Will your team support us during the integration setup?”

Conclusion: Build a Unified, Efficient Billing Ecosystem with FlexPoint

MSPs evaluating FlexPoint consistently prioritize seamless integration as a key capability.

The reason is that when PSA tools, accounting software, and billing platforms work harmoniously, the result is operational efficiency, reduced manual effort, and a healthier cash flow. 

Without proper integration, MSPs often find themselves stuck with time-consuming workarounds and delays in reconciliation. This leads to billing inaccuracies that erode both productivity and client trust.

FlexPoint solves this challenge with real-time, bidirectional integrations that unify your entire billing ecosystem. 

With deep connections to top-requested platforms like ConnectWise, QuickBooks Online, QuickBooks Desktop, Xero, Autotask, HaloPSA, SuperOps, Quoter, and Rewst, FlexPoint ensures that service tickets, invoices, and payments flow effortlessly and accurately between systems. 

No more data silos. No more double entry. Just accurate, consistent, and reliable billing operations. By bringing your tools together, FlexPoint not only streamlines billing but also provides you with the clarity and control to run your business more efficiently, with greater financial confidence.

If you're looking for a billing platform that integrates deeply with your existing systems and automates your entire billing workflow from PSA to payment, FlexPoint is built for your whole MSP team.

Ready to see how FlexPoint can modernize your billing?

Schedule a product tour and discover how it works seamlessly with ConnectWise, QuickBooks, Xero, and more.

Additional FAQs: FlexPoint Integrations

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